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Survival-associated eQTLs across different cancer types


We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "STAD"
e.g., "rs1824937"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
LGG rs7074642 chr10:878359 A/G 3.62E-5 407 15.13 17.73 12.17 KM Plot
LGG rs7077278 chr10:911291 A/G 4.61E-6 407 10.57 17.73 15.02 KM Plot
LGG rs7083119 chr10:80592497 A/G 1.42E-7 407 0 10.73 15.97 KM Plot
LGG rs7084844 chr10:106345309 A/G 1.85E-8 407 0 10.63 15.67 KM Plot
LGG rs7088801 chr10:33368644 A/G 4.44E-16 407 15.17 16.28 4.6 KM Plot
LGG rs7088956 chr10:908693 G/A 1.13E-5 405 15.25 17.03 10.57 KM Plot
LGG rs7089997 chr10:122103734 A/G 2.17E-7 407 20.82 14.43 15.47 KM Plot
LGG rs7093556 chr10:35854700 G/T 1.32E-5 407 0 11.9 15.37 KM Plot
LGG rs7099949 chr10:122598631 A/G 2.26E-5 407 16.3 15.17 12.35 KM Plot
LGG rs7100401 chr10:64024417 C/G 0.000115 400 12.17 15.47 15.83 KM Plot
LGG rs7101203 chr10:98782479 A/G 3.75E-6 407 44.5 11.75 15.88 KM Plot
LGG rs71113414 chr15:31965812 C/CA 0.000122 404 15.93 14.87 11.8 KM Plot
LGG rs71150448 chr3:126268092 A/AC 3.78E-5 404 9.87 14.77 15.78 KM Plot
LGG rs7118316 chr11:61148169 A/G 0.000216 396 16.68 18.22 14.57 KM Plot
LGG rs71323679 chr3:38883676 T/C 4.47E-5 406 15.15 16.37 11.63 KM Plot